LearningGradientFieldsforMolecularConformationGenerationChenceShi12ShitongLuo3MinkaiXu12JianTang145Abstractamorenaturalandintrinsicrepresentationformoleculesistheirthree-dimensionalstructures,where...
ImprovingMolecularGraphNeuralNetworkExplainabilitywithOrthonormalizationandInducedSparsityRyanHenderson1Djork-Arne´Clevert1FlorianeMontanari1AbstractHowever,theopaquenatureofartificialneuralnetwor...
GraphDF:ADiscreteFlowModelforMolecularGraphGenerationYouzhiLuo1KeqiangYan1ShuiwangJi1Abstractdatatocontinuousdatabyaddingreal-valuednoise.How-ever,suchdequantizationprocessingpreventsmodelsfromWeco...
AnEnd-to-EndFrameworkforMolecularConformationGenerationviaBilevelProgrammingMinkaiXu12WujieWang3ShitongLuo4ChenceShi12YoshuaBengio125RafaelGomez-Bombarelli3JianTang156Abstractthoughthisisempiricall...
ReinforcementLearningforMolecularDesignGuidedbyQuantumMechanicsGregorN.C.Simm1RobertPinsler1Jose´MiguelHerna´ndez-Lobato1AbstractFigure1.VisualizationoftheMoleculardesignprocesspresentedinthiswor...
ImprovingMolecularDesignbyStochasticIterativeTargetAugmentationKevinYang1WengongJin2KyleSwanson3ReginaBarzilay2TommiJaakkola2Abstractascomplexgraph-structuredobjects.Asaresult,thesemod-elsrequireco...
HierarchicalGenerationofMolecularGraphsusingStructuralMotifsWengongJin1ReginaBarzilay1TommiJaakkola1Abstractgradientsacrosstheiterativesteps.Graphgenerationtechniquesareincreasinglybe-Largemolecule...
DeepMolecularProgramming:ANaturalImplementationofBinary-WeightReLUNeuralNetworksMarkoVasic1CameronChalk1SarfrazKhurshid1DavidSoloveichik1AbstractChemicalcontrolmodulescompatiblewiththechemicalenvir...
MolecularHypergraphGrammarwithItsApplicationtoMolecularOptimizationHiroshiKajino1Abstractproblemistoobtainm∈Msuchthat,Molecularoptimizationaimstodiscovernovelm=argmaxf(m),(1)moleculeswithdesirable...
JunctionTreeVariationalAutoencoderforMolecularGraphGenerationWengongJin1ReginaBarzilay1TommiJaakkola1AbstractFigure1.TwoalmostidenticalmoleculeswithmarkedlydifferentcanonicalSMILESinRDKit.Theeditdi...